CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSOCUG00000027238
(
Oryctolagus cuniculus
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
ENSOCUG00000027238
T60470_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000024867
S1
13
85
PALYTIFQGKVAMVTDHGAFIKIPGCRKQGLVHRTHMSSSWVDKPSEIVDVGDKVWVKFIGQEMKNNRIKVSL
Links
Other
S1
family RBPs
Other
Oryctolagus cuniculus
RBPs
33 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NUP153
Danio rerio
ENSDARG00000020323
N
0.000
NUP153
Gasterosteus aculeatus
ENSGACG00000005389
N
0.000
NUP153
Takifugu rubripes
ENSTRUG00000010163
N
0.000
NUP153
Tetraodon nigroviridis
ENSTNIG00000009182
N
0.000