CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NUP153
(
Takifugu rubripes
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSTRUG00000010163
T26858_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000025584
RanBP ZF
672
698
GWTCDACLVQNKPSDKKCVCCMTPQPN
ENSTRUP00000025584
RanBP ZF
736
765
PVGTWDCDTCLVRNKADAVKCVACETAKPG
ENSTRUP00000025584
RanBP ZF
805
834
AEGAWECDTCMVENKAEATKCVACMNTKPE
ENSTRUP00000025584
RanBP ZF
864
893
PEGSWDCDVCLVQNKAADVECVACQTPKPG
ENSTRUP00000025585
RanBP ZF
661
687
GWTCDACLVQNKPSDKKCVCCMTPQPN
ENSTRUP00000025585
RanBP ZF
725
754
PVGTWDCDTCLVRNKADAVKCVACETAKPG
ENSTRUP00000025585
RanBP ZF
794
823
AEGAWECDTCMVENKAEATKCVACMNTKPE
ENSTRUP00000025585
RanBP ZF
853
882
PEGSWDCDVCLVQNKAADVECVACQTPKPG
ENSTRUP00000025586
RanBP ZF
618
644
GWTCDACLVQNKPSDKKCVCCMTPQPN
ENSTRUP00000025586
RanBP ZF
682
711
PVGTWDCDTCLVRNKADAVKCVACETAKPG
ENSTRUP00000025586
RanBP ZF
751
780
AEGAWECDTCMVENKAEATKCVACMNTKPE
ENSTRUP00000025586
RanBP ZF
810
839
PEGSWDCDVCLVQNKAADVECVACQTPKPG
ENSTRUP00000025587
RanBP ZF
644
670
GWTCDACLVQNKPSDKKCVCCMTPQPN
ENSTRUP00000025587
RanBP ZF
708
737
PVGTWDCDTCLVRNKADAVKCVACETAKPG
ENSTRUP00000025587
RanBP ZF
777
806
AEGAWECDTCMVENKAEATKCVACMNTKPE
ENSTRUP00000025587
RanBP ZF
836
865
PEGSWDCDVCLVQNKAADVECVACQTPKPG
Links
Other
RanBP ZF
family RBPs
Other
Takifugu rubripes
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NUP153
Tetraodon nigroviridis
ENSTNIG00000009182
N
0.880
NUP153
Gasterosteus aculeatus
ENSGACG00000005389
N
0.795
NUP153
Oryzias latipes
ENSORLG00000012674
N
0.773
NUP153
Danio rerio
ENSDARG00000020323
N
0.700