CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NUP153
(
Danio rerio
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSDARG00000020323
T26368_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000033046
RanBP ZF
634
663
PAGSWNCGTCMLQNKPSDKKCVACLAPQPN
ENSDARP00000033046
RanBP ZF
687
716
PAGSWECDTCLVSNKPDAVKCVACDTAKPG
ENSDARP00000033046
RanBP ZF
761
790
PEGAWDCDVCMVQNKAQDLKCVACLTAKPG
ENSDARP00000033046
RanBP ZF
820
849
PEGSWECDVCCVQNKADDQQCVACQSAKPG
Links
Other
RanBP ZF
family RBPs
Other
Danio rerio
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NUP153
Oryzias latipes
ENSORLG00000012674
N
0.742
NUP153
Gasterosteus aculeatus
ENSGACG00000005389
N
0.733
NUP153
Tetraodon nigroviridis
ENSTNIG00000009182
N
0.725
NUP153
Takifugu rubripes
ENSTRUG00000010163
N
0.700