CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SRBD1
(
Vicugna pacos
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
ENSVPAG00000006825
T60591_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSVPAP00000006341
S1
825
902
DLQVGTVLTGKVENATLFGIFVDIGVGRSGLIPIRNVTEAKLSKTKKRRSLGLGPGERVEVRVLNIDIPRSRITLDLI
Links
Other
S1
family RBPs
Other
Vicugna pacos
RBPs
35 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL009659
Aedes aegypti
AAEL009659
N
0.000
AGAP012054
Anopheles gambiae
AGAP012054
N
0.000
CpipJ_CPIJ006198
Culex pipiens
CpipJ_CPIJ006198
N
0.000
CpipJ_CPIJ018342
Culex pipiens
CpipJ_CPIJ018342
N
0.000
CPIJ006198
Culex quinquefasciatus
CPIJ006198
N
0.000
CPIJ018342
Culex quinquefasciatus
CPIJ018342
N
0.000
GF13176
Drosophila ananassae
FBgn0090209
N
0.000
GG20899
Drosophila erecta
FBgn0113083
N
0.000
sm
Drosophila melanogaster
FBgn0003435
D
0.000