CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CPIJ018342
(
Culex quinquefasciatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CPIJ018342
T34336_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPIJ018342-PA
RRM
73
137
MMVYGLDSSTANTDKLFNLFCLYGNVVRIKFLKTKEGTAMVQMGDAIAVERSIQHLNNIPIGNDG
CPIJ018342-PA
RRM
198
264
FNTPPGMSEDQLLQAFTSKDCHPAQVRMFPLKSERSSSGLVEFPSVSLAVAAIMKCNHSAIDHKEVG
Links
Other
RRM
family RBPs
Other
Culex quinquefasciatus
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CpipJ_CPIJ018342
Culex pipiens
CpipJ_CPIJ018342
N
1.000
CPIJ006198
Culex quinquefasciatus
CPIJ006198
N
0.977
CpipJ_CPIJ006198
Culex pipiens
CpipJ_CPIJ006198
N
0.977
AAEL009659
Aedes aegypti
AAEL009659
N
0.932
AGAP012054
Anopheles gambiae
AGAP012054
N
0.848
GF13176
Drosophila ananassae
FBgn0090209
N
0.705
GG20899
Drosophila erecta
FBgn0113083
N
0.705
sm
Drosophila melanogaster
FBgn0003435
D
0.705
GM19822
Drosophila sechellia
FBgn0174708
N
0.705