CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AAEL009659
(
Aedes aegypti
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AAEL009659
T32389_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAEL009659-PA
RRM
289
353
MMVYGLDNSTANTDKLFNLFCLYGNVVRIKFLKTKEGTAMVQMGDAIAVERSIQHLNNIPIGNDG
AAEL009659-PA
RRM
414
479
FNTPPGMSEDQLLNAFTSKDCLPSQVRMFPLKSERSSSGLVEFPSVALAVNAIMKCNHSAIDHKGT
Links
Other
RRM
family RBPs
Other
Aedes aegypti
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CpipJ_CPIJ006198
Culex pipiens
CpipJ_CPIJ006198
N
0.954
CPIJ006198
Culex quinquefasciatus
CPIJ006198
N
0.954
CpipJ_CPIJ018342
Culex pipiens
CpipJ_CPIJ018342
N
0.932
CPIJ018342
Culex quinquefasciatus
CPIJ018342
N
0.932
AGAP012054
Anopheles gambiae
AGAP012054
N
0.885
GM19822
Drosophila sechellia
FBgn0174708
N
0.712
GF13176
Drosophila ananassae
FBgn0090209
N
0.712
sm
Drosophila melanogaster
FBgn0003435
D
0.712
GG20899
Drosophila erecta
FBgn0113083
N
0.712