CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Pa_2_830
(
Podospora anserina
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
Pa_2_830
T61634_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pa_2_830
S1
1100
1170
LCEGMIVPVNVRVVKDDFAIVKLDCGIEGRIEAHETSHRHSVKDVLSVGQTVQAKLIDVNRKDMTCKLTMR
Links
Other
S1
family RBPs
Other
Podospora anserina
RBPs
14 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSACAG00000008874
Anolis carolinensis
ENSACAG00000008874
N
0.000
EIF3B_BOVIN
Bos taurus
ENSBTAG00000007474
N
0.000
EIF3B
Callithrix jacchus
ENSCJAG00000001442
N
0.000
EIF3B
Canis familiaris
ENSCAFG00000016418
N
0.000
ENSCPOG00000012541
Cavia porcellus
ENSCPOG00000012541
N
0.000
ENSCPOG00000020547
Cavia porcellus
ENSCPOG00000020547
N
0.000
si:dkey-26i13.2
Danio rerio
ENSDARG00000074213
N
0.000
Eif3b
Dipodomys ordii
ENSDORG00000001401
N
0.000
EIF3B
Echinops telfairi
ENSETEG00000001719
N
0.000
LOC100059693
Equus caballus
ENSECAG00000013671
N
0.000
EIF3B
Erinaceus europaeus
ENSEEUG00000014359
N
0.000
EIF3B
Felis catus
ENSFCAG00000005392
N
0.000
EIF3B
Gallus gallus
ENSGALG00000004269
N
0.000
EIF3B
Gasterosteus aculeatus
ENSGACG00000016738
N
0.000
EIF3B
Homo sapiens
ENSG00000106263
N
0.000
EIF3B
Loxodonta africana
ENSLAFG00000001540
N
0.000
EIF3B
Macaca mulatta
ENSMMUG00000015529
N
0.000
EIF3B
Meleagris gallopavo
ENSMGAG00000002719
N
0.000
EIF3B
Microcebus murinus
ENSMICG00000010103
N
0.000
EIF3B
Monodelphis domestica
ENSMODG00000009778
N
0.000
Eif3b
Mus musculus
ENSMUSG00000056076
N
0.000
EIF3B
Myotis lucifugus
ENSMLUG00000013740
N
0.000
EIF3B
Ornithorhynchus anatinus
ENSOANG00000004314
N
0.000
EIF3B
Oryctolagus cuniculus
ENSOCUG00000010289
N
0.000
EIF3B
Oryzias latipes
ENSORLG00000008861
N
0.000
XR_023016.1
Pan troglodytes
ENSPTRG00000018860
N
0.000
ENSPPYG00000017313
Pongo pygmaeus
ENSPPYG00000017313
N
0.000
EIF3B
Pteropus vampyrus
ENSPVAG00000013735
N
0.000
Eif3b
Rattus norvegicus
ENSRNOG00000001253
N
0.000
EIF3B
Sorex araneus
ENSSARG00000006036
N
0.000
EIF3B
Sus scrofa
ENSSSCG00000007571
N
0.000
EIF3B
Taeniopygia guttata
ENSTGUG00000008140
N
0.000
EIF3B
Takifugu rubripes
ENSTRUG00000011064
N
0.000
EIF3B
Tarsius syrichta
ENSTSYG00000008256
N
0.000
EIF3B
Tursiops truncatus
ENSTTRG00000014713
N
0.000
AAH92246
Xenopus laevis
AAH92246
N
0.000
Q569Z1
Xenopus laevis
Q569Z1
N
0.000
eif3b
Xenopus tropicalis
ENSXETG00000020593
N
0.000