CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Pa_2_830
(
Podospora anserina
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
Pa_2_830
T61634_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pa_2_830
S1
1100
1170
LCEGMIVPVNVRVVKDDFAIVKLDCGIEGRIEAHETSHRHSVKDVLSVGQTVQAKLIDVNRKDMTCKLTMR
Links
Other
S1
family RBPs
Other
Podospora anserina
RBPs
14 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CHGG_10339
Chaetomium globosum
CHGG_10339
N
0.000
estExt_Genewise1.C_71071
Myceliophthora thermophila
estExt_Genewise1.C_71071
N
0.000
NCU01695
Neurospora crassa
NCU01695
N
0.000
estExt_Genewise1.C_100732
Neurospora discreta
estExt_Genewise1.C_100732
N
0.000
fgenesh1_pm.C_scaffold_13000026
Neurospora tetrasperma
fgenesh1_pm.C_scaffold_13000026
N
0.000
SS1G_01626
Sclerotinia sclerotiorum
SS1G_01626
N
0.000
estExt_Genewise1.C_61734
Thielavia terrestris
estExt_Genewise1.C_61734
N
0.000
estExt_Genewise1Plus.C_70552
Trichoderma atroviride
estExt_Genewise1Plus.C_70552
N
0.000
e_gw1.11.100.1
Trichoderma reesei
e_gw1.11.100.1
N
0.000