si:dkey-26i13.2 (Danio rerio)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDARG00000074213 T36221_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000101986 RRM 80 137

Links

Other RRM family RBPs
Other Danio rerio RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
EIF3B Oryzias latipes ENSORLG00000008861 N 0.931
EIF3B Takifugu rubripes ENSTRUG00000011064 N 0.897
EIF3B Tetraodon nigroviridis ENSTNIG00000004648 N 0.879
EIF3B Myotis lucifugus ENSMLUG00000013740 N 0.862
EIF3B Pteropus vampyrus ENSPVAG00000013735 N 0.862
EIF3B Gasterosteus aculeatus ENSGACG00000016738 N 0.862
EIF3B Tursiops truncatus ENSTTRG00000014713 N 0.862
EIF3B_BOVIN Bos taurus ENSBTAG00000007474 N 0.862
EIF3B Callithrix jacchus ENSCJAG00000001442 N 0.845
XR_023016.1 Pan troglodytes ENSPTRG00000018860 N 0.845
EIF3B Canis familiaris ENSCAFG00000016418 N 0.845
EIF3B Taeniopygia guttata ENSTGUG00000008140 N 0.845
ENSACAG00000008874 Anolis carolinensis ENSACAG00000008874 N 0.845
EIF3B Sus scrofa ENSSSCG00000007571 N 0.845
ENSPPYG00000017313 Pongo pygmaeus ENSPPYG00000017313 N 0.845
EIF3B Loxodonta africana ENSLAFG00000001540 N 0.845
EIF3B Meleagris gallopavo ENSMGAG00000002719 N 0.845
EIF3B Homo sapiens ENSG00000106263 N 0.845
EIF3B Felis catus ENSFCAG00000005392 N 0.845
LOC100059693 Equus caballus ENSECAG00000013671 N 0.845
EIF3B Microcebus murinus ENSMICG00000010103 N 0.845
EIF3B Gallus gallus ENSGALG00000004269 N 0.845
EIF3B Macaca mulatta ENSMMUG00000015529 N 0.845
EIF3B Sorex araneus ENSSARG00000006036 N 0.831
AAH92246 Xenopus laevis AAH92246 N 0.828
Q569Z1 Xenopus laevis Q569Z1 N 0.828
ENSCPOG00000012541 Cavia porcellus ENSCPOG00000012541 N 0.828
ENSCPOG00000020547 Cavia porcellus ENSCPOG00000020547 N 0.828
EIF3B Monodelphis domestica ENSMODG00000009778 N 0.828
EIF3B Echinops telfairi ENSETEG00000001719 N 0.828
EIF3B Tarsius syrichta ENSTSYG00000008256 N 0.817
EIF3B Erinaceus europaeus ENSEEUG00000014359 N 0.810
eif3b Xenopus tropicalis ENSXETG00000020593 N 0.810
EIF3B Ornithorhynchus anatinus ENSOANG00000004314 N 0.810
Eif3b Mus musculus ENSMUSG00000056076 N 0.810
Eif3b Dipodomys ordii ENSDORG00000001401 N 0.810
Eif3b Rattus norvegicus ENSRNOG00000001253 N 0.810
EIF3B Oryctolagus cuniculus ENSOCUG00000010289 N 0.800