BGIOSIBCE003171 (Oryza indica)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 BGIOSIBCE003171 T61939_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BGIOSIBCE003171 YTH 406 496

Links

Other YTH family RBPs
Other Oryza indica RBPs

199 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s1074g3t1 Acyrtosiphon pisum DGIL_AUG5s1074g3t1 I 0.000
Ame_R006395 Ailuropoda melanoleuca Ame_R006395 I 0.000
SRSF2 Anolis carolinensis ENSACAG00000008553 I 0.000
amel4_ncbi_hmm3241 Apis mellifera amel4_ncbi_hmm3241 I 0.000
SFRS2_BOVIN Bos taurus ENSBTAG00000018258 I 0.000
fgenesh2_pg.scaffold_240000061 Branchiostoma floridae fgenesh2_pg.scaffold_240000061 I 0.000
LOC100407351 Callithrix jacchus ENSCJAG00000004211 I 0.000
LOC100409845 Callithrix jacchus ENSCJAG00000013412 I 0.000
SRSF2 Canis familiaris ENSCAFG00000005147 I 0.000
SRSF2 Choloepus hoffmanni ENSCHOG00000014019 I 0.000
ENSCING00000004198 Ciona intestinalis ENSCING00000004198 I 0.000
ENSCSAVG00000009199 Ciona savignyi ENSCSAVG00000009199 I 0.000
SRSF2 Danio rerio ENSDARG00000010906 I 0.000
srsf2 Danio rerio ENSDARG00000057484 I 0.000
SRSF2 Dasypus novemcinctus ENSDNOG00000000439 I 0.000
Srsf2 Dipodomys ordii ENSDORG00000014460 I 0.000
SRSF2 Gasterosteus aculeatus ENSGACG00000003105 I 0.000
SRSF2 Gasterosteus aculeatus ENSGACG00000014884 I 0.000
SRSF2 Gorilla gorilla ENSGGOG00000014378 I 0.000
SRSF2 Homo sapiens ENSG00000161547 D 0.000
ENSG00000180771 Homo sapiens ENSG00000180771 I 0.000
LOC707883 Macaca mulatta ENSMMUG00000022413 I 0.000
ENSMMUG00000007639 Macaca mulatta ENSMMUG00000007639 I 0.000
SRSF2 Macropus eugenii ENSMEUG00000016745 I 0.000
SRSF2 Meleagris gallopavo ENSMGAG00000004083 I 0.000
SRSF2 Microcebus murinus ENSMICG00000016956 I 0.000
SRSF2 Monodelphis domestica ENSMODG00000001575 I 0.000
Srsf2 Mus musculus ENSMUSG00000034120 I 0.000
SRSF2 Myotis lucifugus ENSMLUG00000009759 I 0.000
SRSF2 Ornithorhynchus anatinus ENSOANG00000002695 I 0.000
SRSF2 Oryctolagus cuniculus ENSOCUG00000021840 I 0.000
SRSF2 Oryzias latipes ENSORLG00000001230 I 0.000
Q9DGK5_ORYLA Oryzias latipes ENSORLG00000018688 I 0.000
ENSPTRG00000034554 Pan troglodytes ENSPTRG00000034554 I 0.000
SFRS2_PANTR Pan troglodytes ENSPTRG00000009692 I 0.000
ENSPPYG00000008668 Pongo pygmaeus ENSPPYG00000008668 I 0.000
SRSF2 Pteropus vampyrus ENSPVAG00000014264 I 0.000
Sfrs2 Rattus norvegicus ENSRNOG00000000248 I 0.000
SRSF2 Sus scrofa ENSSSCG00000012212 I 0.000
SRSF2 Taeniopygia guttata ENSTGUG00000007799 I 0.000
SRSF2 Takifugu rubripes ENSTRUG00000002362 I 0.000
SRSF2 Takifugu rubripes ENSTRUG00000018104 I 0.000
SRSF2 Tetraodon nigroviridis ENSTNIG00000001280 I 0.000
amel4_ncbi_hmm3241 Tribolium castaneum amel4_ncbi_hmm3241 I 0.000
SRSF2 Tupaia belangeri ENSTBEG00000014339 I 0.000
AAH45229 Xenopus laevis AAH45229 I 0.000
srsf2 Xenopus tropicalis ENSXETG00000025271 I 0.000