chr5.LjT10N02.330.nd (Lotus japonicus)
CCCH ZF,KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00013 (KH_1) 		IPR000571
IPR018111 		chr5.LjT10N02.330.nd T00220_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
chr5.LjT10N02.330.nd CCCH ZF 6 21
chr5.LjT10N02.330.nd KH 83 145
chr5.LjT10N02.330.nd CCCH ZF 186 211

Links

Other CCCH ZF,KH family RBPs
Other Lotus japonicus RBPs

3 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GSVIVG00033508001 Vitis vinifera GSVIVG00033508001 N 0.733
Cucsa.242740 Cucumis sativus Cucsa.242740 N 0.722
Cucsa.263980 Cucumis sativus Cucsa.263980 N 0.704