CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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U2AF1L4
(
Tursiops truncatus
)
CCCH ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1)
IPR000571
IPR000504
ENSTTRG00000003816
T00646_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTTRP00000003575
CCCH ZF
13
39
KDEVNCSFYFKIGACRHGDRCSRLHNK
ENSTTRP00000003575
RRM
37
102
HNKPTFSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVH
Links
Other
CCCH ZF,RRM
family RBPs
Other
Tursiops truncatus
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
U2AF1L4
Sorex araneus
ENSSARG00000002027
N
0.978
Ame_R009106
Ailuropoda melanoleuca
Ame_R009106
N
0.978
U2AF1L4
Felis catus
ENSFCAG00000006383
N
0.978
U2AF1L4
Choloepus hoffmanni
ENSCHOG00000001034
N
0.978
U2af1l4
Dipodomys ordii
ENSDORG00000009078
N
0.968
U2AF1L4
Pteropus vampyrus
ENSPVAG00000012843
N
0.968
U2AF1L4
Macropus eugenii
ENSMEUG00000015882
N
0.957
ENSETEG00000004795
Echinops telfairi
ENSETEG00000004795
N
0.957
U2AF1L4
Homo sapiens
ENSG00000161265
N
0.946
U2AF1L4
Microcebus murinus
ENSMICG00000009981
N
0.796