Cucsa.042290 (Cucumis sativus)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		Cucsa.042290 T00856_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.042290.1 CCCH ZF 170 195
Cucsa.042290.1 RRM 336 396
Cucsa.042290.2 CCCH ZF 163 188
Cucsa.042290.2 RRM 329 389
Cucsa.042290.3 CCCH ZF 163 188
Cucsa.042290.3 RRM 329 389

Links

Other CCCH ZF,RRM family RBPs
Other Cucumis sativus RBPs

2 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GSVIVG00037782001 Vitis vinifera GSVIVG00037782001 N 0.713