estExt_fgenesh2_pg.C_1250066 (Branchiostoma floridae)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		estExt_fgenesh2_pg.C_1250066 T00896_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_1250066 CCCH ZF 186 210
estExt_fgenesh2_pg.C_1250066 RRM 261 315
estExt_fgenesh2_pg.C_1250066 CCCH ZF 324 349

Links

Other CCCH ZF,RRM family RBPs
Other Branchiostoma floridae RBPs

4 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh2_pg.C_300183 Branchiostoma floridae estExt_fgenesh2_pg.C_300183 N 1.000
zrsr2 Danio rerio ENSDARG00000058448 N 0.730
Q9W6Q9_FUGRU Takifugu rubripes ENSTRUG00000017089 N 0.712
ZRSR2 Tetraodon nigroviridis ENSTNIG00000009495 N 0.703