gw1.3.679.1 (Fragilariopsis cylindrus)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		gw1.3.679.1 T00980_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.3.679.1 CCCH ZF 11 37
gw1.3.679.1 RRM 91 149
gw1.3.679.1 CCCH ZF 158 183

Links

Other CCCH ZF,RRM family RBPs
Other Fragilariopsis cylindrus RBPs

2 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
THAPSDRAFT_270037 Thalassiosira pseudonana Thaps270037 N 0.795
PHATRDRAFT_29958 Phaeodactylum tricornutum Phatr29958 N 0.741