CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LELG_02816
(
Lodderomyces elongisporus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
LELG_02816
T01419_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
LELT_02816
CCCH ZF
3
23
SNFFRQGTCQAGDSFPFSHNI
LELT_02816
CCCH ZF
31
52
KIPCKYFLRGNCKFGMKCALAH
Links
Other
CCCH ZF
family RBPs
Other
Lodderomyces elongisporus
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPAG_02338
Candida parapsilosis
CPAG_02338
N
0.766