CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CRE27455
(
Caenorhabditis remanei
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
CRE27455
T02201_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE27455
CCCH ZF
134
157
KFTCKNYLKGKCRFGDKCRFSHPV
Links
Other
CCCH ZF
family RBPs
Other
Caenorhabditis remanei
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ccch-3
Caenorhabditis elegans
W05B10.2
N
1.000
CBG08548
Caenorhabditis briggsae
CBG08548
N
1.000
CJA17607
Caenorhabditis japonica
CJA17607
N
0.958
CBN23109
Caenorhabditis brenneri
CBN23109
N
0.917