CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ZC3H7B
(
Cavia porcellus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSCPOG00000004413
T02391_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000003982
CCCH ZF
491
504
NKQDCKYGDNCTFA
ENSCPOP00000003982
CCCH ZF
618
638
CRHEVRYGCLREDSCHFAHSF
ENSCPOP00000003982
CCCH ZF
756
782
QQYDLCIHAQNGRKCQYVGNCSFAHSP
ENSCPOP00000003982
CCCH ZF
889
914
EFRLCDRLQKGKACPDGDKCRCAHGQ
Links
Other
CCCH ZF
family RBPs
Other
Cavia porcellus
RBPs
23 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSPPYG00000011866
Pongo pygmaeus
ENSPPYG00000011866
N
1.000
ZC3H7B
Pteropus vampyrus
ENSPVAG00000001159
N
1.000
ZC3H7B
Bos taurus
ENSBTAG00000002782
N
1.000
ZC3H7B
Canis familiaris
ENSCAFG00000001099
N
1.000
ZC3H7B
Dasypus novemcinctus
ENSDNOG00000007676
N
1.000
Zc3h7b
Mus musculus
ENSMUSG00000022390
N
1.000
ZC3H7B
Gorilla gorilla
ENSGGOG00000014138
N
1.000
ZC3H7B
Homo sapiens
ENSG00000100403
N
1.000
ZC3H7B
Erinaceus europaeus
ENSEEUG00000008452
N
1.000
ZC3H7B
Equus caballus
ENSECAG00000010103
N
1.000
ZC3H7B
Ochotona princeps
ENSOPRG00000013540
N
0.989
Zc3h7b
Rattus norvegicus
ENSRNOG00000019348
N
0.989
ZC3H7B
Procavia capensis
ENSPCAG00000009517
N
0.989
ZC3H7B
Oryctolagus cuniculus
ENSOCUG00000002712
N
0.956
ZC3H7B
Macaca mulatta
ENSMMUG00000005219
N
0.955
ZC3H7B
Pan troglodytes
ENSPTRG00000014424
N
0.932
ZC3H7B
Myotis lucifugus
ENSMLUG00000003292
N
0.920
ZC3H7B
Monodelphis domestica
ENSMODG00000016546
N
0.904
ZC3H7B
Macropus eugenii
ENSMEUG00000014072
N
0.884
ZC3H7B
Anolis carolinensis
ENSACAG00000004820
N
0.862
ZC3H7B
Taeniopygia guttata
ENSTGUG00000009946
N
0.862
ZC3H7B
Meleagris gallopavo
ENSMGAG00000012234
N
0.851
ZC3H7B
Gallus gallus
ENSGALG00000011965
N
0.851