CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZC3H7B
(
Ochotona princeps
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSOPRG00000013540
T03118_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000012378
CCCH ZF
503
516
NKQDCKYGDNCTFA
ENSOPRP00000012378
CCCH ZF
630
650
CRHEVRYGCLREDSCHFAHSF
ENSOPRP00000012378
CCCH ZF
768
794
QQYDLCIHAQNGRKCQYVGNCSFAHSP
ENSOPRP00000012378
CCCH ZF
901
926
EFRLCDRLQKGKVCPDGDKCRCAHGQ
Links
Other
CCCH ZF
family RBPs
Other
Ochotona princeps
RBPs
23 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Zc3h7b
Rattus norvegicus
ENSRNOG00000019348
N
1.000
ZC3H7B
Erinaceus europaeus
ENSEEUG00000008452
N
0.989
ZC3H7B
Cavia porcellus
ENSCPOG00000004413
N
0.989
ZC3H7B
Dasypus novemcinctus
ENSDNOG00000007676
N
0.989
ZC3H7B
Homo sapiens
ENSG00000100403
N
0.989
Zc3h7b
Mus musculus
ENSMUSG00000022390
N
0.989
ZC3H7B
Gorilla gorilla
ENSGGOG00000014138
N
0.989
ZC3H7B
Canis familiaris
ENSCAFG00000001099
N
0.989
ZC3H7B
Equus caballus
ENSECAG00000010103
N
0.989
ZC3H7B
Bos taurus
ENSBTAG00000002782
N
0.989
ZC3H7B
Pteropus vampyrus
ENSPVAG00000001159
N
0.989
ENSPPYG00000011866
Pongo pygmaeus
ENSPPYG00000011866
N
0.989
ZC3H7B
Procavia capensis
ENSPCAG00000009517
N
0.977
ZC3H7B
Oryctolagus cuniculus
ENSOCUG00000002712
N
0.967
ZC3H7B
Macaca mulatta
ENSMMUG00000005219
N
0.943
ZC3H7B
Myotis lucifugus
ENSMLUG00000003292
N
0.920
ZC3H7B
Pan troglodytes
ENSPTRG00000014424
N
0.920
ZC3H7B
Monodelphis domestica
ENSMODG00000016546
N
0.894
ZC3H7B
Macropus eugenii
ENSMEUG00000014072
N
0.874
ZC3H7B
Anolis carolinensis
ENSACAG00000004820
N
0.862
ZC3H7B
Taeniopygia guttata
ENSTGUG00000009946
N
0.851
ZC3H7B
Gallus gallus
ENSGALG00000011965
N
0.840
ZC3H7B
Meleagris gallopavo
ENSMGAG00000012234
N
0.840