CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DHX57
(
Cavia porcellus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSCPOG00000009155
T02397_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000008219
CCCH ZF
297
320
LETCRFYLKGNCKFGSRCKFKHEV
Links
Other
CCCH ZF
family RBPs
Other
Cavia porcellus
RBPs
29 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Dhx57
Dipodomys ordii
ENSDORG00000013864
N
0.958
DHX57
Oryctolagus cuniculus
ENSOCUG00000015602
N
0.917
Ame_R012468
Ailuropoda melanoleuca
Ame_R012468
N
0.917
DHX57
Canis familiaris
ENSCAFG00000006228
N
0.917
DHX57
Loxodonta africana
ENSLAFG00000002497
N
0.917
DHX57
Procavia capensis
ENSPCAG00000002696
N
0.917
DHX57
Felis catus
ENSFCAG00000006258
N
0.880
Q0V8H0_BOVIN
Bos taurus
ENSBTAG00000014679
N
0.875
DHX57
Equus caballus
ENSECAG00000018758
N
0.875
DHX57
Macaca mulatta
ENSMMUG00000021066
N
0.875
DHX57
Callithrix jacchus
ENSCJAG00000015097
N
0.875
DHX57
Gorilla gorilla
ENSGGOG00000008187
N
0.875
DHX57
Tarsius syrichta
ENSTSYG00000003905
N
0.840
DHX57
Vicugna pacos
ENSVPAG00000003319
N
0.840
Dhx57
Rattus norvegicus
ENSRNOG00000027329
N
0.840
DHX57
Pteropus vampyrus
ENSPVAG00000012080
N
0.840
ENSPPYG00000012478
Pongo pygmaeus
ENSPPYG00000012478
N
0.840
Dhx57
Mus musculus
ENSMUSG00000035051
N
0.840
DHX57
Ochotona princeps
ENSOPRG00000010262
N
0.840
DHX57
Pan troglodytes
ENSPTRG00000011853
N
0.833
DHX57
Myotis lucifugus
ENSMLUG00000014775
N
0.833
DHX57
Homo sapiens
ENSG00000163214
N
0.833
DHX57
Choloepus hoffmanni
ENSCHOG00000004647
N
0.833
DHX57
Tursiops truncatus
ENSTTRG00000014328
N
0.800
DHX57
Sus scrofa
ENSSSCG00000008479
N
0.800
DHX57
Tupaia belangeri
ENSTBEG00000005067
N
0.800
DHX57
Dasypus novemcinctus
ENSDNOG00000016122
N
0.800
DHX57
Erinaceus europaeus
ENSEEUG00000004743
N
0.792
DHX57
Echinops telfairi
ENSETEG00000012624
N
0.769