MKRN2 (Erinaceus europaeus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSEEUG00000002217 T02552_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000002018 CCCH ZF 1 19
ENSEEUP00000002018 CCCH ZF 25 41
ENSEEUP00000002018 CCCH ZF 131 155
ENSEEUP00000002018 CCCH ZF 287 312

Links

Other CCCH ZF family RBPs
Other Erinaceus europaeus RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC100057038 Equus caballus ENSECAG00000024404 N 0.890
MKRN2 Echinops telfairi ENSETEG00000003970 N 0.865
Ame_R009492 Ailuropoda melanoleuca Ame_R009492 N 0.860
Mkrn2 Rattus norvegicus ENSRNOG00000009176 N 0.853
MKRN2 Cavia porcellus ENSCPOG00000001208 N 0.847
MKRN2 Callithrix jacchus ENSCJAG00000016733 N 0.844
MKRN2 Macaca mulatta ENSMMUG00000009536 N 0.842
MKRN2 Tarsius syrichta ENSTSYG00000007429 N 0.842
MKRN2 Felis catus ENSFCAG00000007979 N 0.842
MKRN2 Homo sapiens ENSG00000075975 N 0.842
MKRN2 Myotis lucifugus ENSMLUG00000017643 N 0.832
MKRN2 Loxodonta africana ENSLAFG00000011601 N 0.825
MKRN2 Oryctolagus cuniculus ENSOCUG00000014171 N 0.825
Mkrn2 Dipodomys ordii ENSDORG00000015621 N 0.812
MKRN2 Pan troglodytes ENSPTRG00000014634 N 0.802
MKRN2 Gorilla gorilla ENSGGOG00000000429 N 0.802
MKRN2 Ochotona princeps ENSOPRG00000003501 N 0.792
Mkrn2 Mus musculus ENSMUSG00000000439 N 0.792
MKRN2 Choloepus hoffmanni ENSCHOG00000005438 N 0.784
MKRN2 Canis familiaris ENSCAFG00000004967 N 0.784
MKRN2 Vicugna pacos ENSVPAG00000011064 N 0.784
ENSPPYG00000013387 Pongo pygmaeus ENSPPYG00000013387 N 0.784
Q2YDI8_BOVIN Bos taurus ENSBTAG00000004512 N 0.784
MKRN2 Procavia capensis ENSPCAG00000016175 N 0.775
MKRN2 Taeniopygia guttata ENSTGUG00000004017 N 0.711