CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MKRN2
(
Macaca mulatta
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSMMUG00000009536
T02924_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000012473
CCCH ZF
3
28
TKQVTCRYFMHGVCREGSQCLFSHDL
ENSMMUP00000012473
CCCH ZF
34
57
STICKYYQKGYCAYGTRCVYDHTR
ENSMMUP00000012473
CCCH ZF
167
191
EQQLCPYAAAGECRFGDACVYLHGE
ENSMMUP00000012473
CCCH ZF
323
348
GKKACKYFEQGKGTCPFGSKCLYRHA
ENSMMUP00000012474
CCCH ZF
3
28
TKQVTCRYFMHGVCREGSQCLFSHDL
ENSMMUP00000012474
CCCH ZF
34
50
STICKYYQKGYCAYGTR
ENSMMUP00000012474
CCCH ZF
165
189
EQQLCPYAAAGECRFGDACVYLHGE
ENSMMUP00000012474
CCCH ZF
321
346
GKKACKYFEQGKGTCPFGSKCLYRHA
Links
Other
CCCH ZF
family RBPs
Other
Macaca mulatta
RBPs
33 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MKRN2
Homo sapiens
ENSG00000075975
N
0.989
MKRN2
Gorilla gorilla
ENSGGOG00000000429
N
0.980
MKRN2
Pan troglodytes
ENSPTRG00000014634
N
0.980
ENSPPYG00000013387
Pongo pygmaeus
ENSPPYG00000013387
N
0.971
MKRN2
Canis familiaris
ENSCAFG00000004967
N
0.971
MKRN2
Ochotona princeps
ENSOPRG00000003501
N
0.960
Mkrn2
Rattus norvegicus
ENSRNOG00000009176
N
0.960
MKRN2
Choloepus hoffmanni
ENSCHOG00000005438
N
0.951
MKRN2
Oryctolagus cuniculus
ENSOCUG00000014171
N
0.951
MKRN2
Vicugna pacos
ENSVPAG00000011064
N
0.951
Mkrn2
Mus musculus
ENSMUSG00000000439
N
0.950
MKRN2
Myotis lucifugus
ENSMLUG00000017643
N
0.948
Q2YDI8_BOVIN
Bos taurus
ENSBTAG00000004512
N
0.922
MKRN2
Callithrix jacchus
ENSCJAG00000016733
N
0.912
MKRN2
Cavia porcellus
ENSCPOG00000001208
N
0.912
MKRN2
Procavia capensis
ENSPCAG00000016175
N
0.912
MKRN2
Felis catus
ENSFCAG00000007979
N
0.902
MKRN2
Tarsius syrichta
ENSTSYG00000007429
N
0.902
MKRN2
Loxodonta africana
ENSLAFG00000011601
N
0.892
LOC100057038
Equus caballus
ENSECAG00000024404
N
0.867
Ame_R009492
Ailuropoda melanoleuca
Ame_R009492
N
0.853
MKRN2
Echinops telfairi
ENSETEG00000003970
N
0.845
MKRN2
Erinaceus europaeus
ENSEEUG00000002217
N
0.842
Mkrn2
Dipodomys ordii
ENSDORG00000015621
N
0.835
MKRN2
Anolis carolinensis
ENSACAG00000013310
N
0.806
Q8UWH3_CHICK
Gallus gallus
ENSGALG00000004991
N
0.796
mkrn2
Danio rerio
ENSDARG00000007630
N
0.745
MKRN2
Taeniopygia guttata
ENSTGUG00000004017
N
0.738
MKRN2
Gasterosteus aculeatus
ENSGACG00000003396
N
0.725
ABR68861
Xenopus laevis
ABR68861
N
0.718
B0F0H3
Xenopus laevis
B0F0H3
N
0.718
AAI06425
Xenopus laevis
AAI06425
N
0.709