CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
TOE1
(
Monodelphis domestica
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSMODG00000002430
T02946_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000002956
CCCH ZF
272
295
GICDTFSAYGWCPLGLQCPLSHDV
Links
Other
CCCH ZF
family RBPs
Other
Monodelphis domestica
RBPs
14 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Toe1
Rattus norvegicus
ENSRNOG00000017561
N
0.769
Toe1
Mus musculus
ENSMUSG00000028688
N
0.769
TOE1
Felis catus
ENSFCAG00000009566
N
0.731
TOE1
Homo sapiens
ENSG00000132773
N
0.731
TOE1
Macaca mulatta
ENSMMUG00000020081
N
0.731
TOE1
Gorilla gorilla
ENSGGOG00000003290
N
0.731
TOE1
Choloepus hoffmanni
ENSCHOG00000004270
N
0.731
TOE1
Vicugna pacos
ENSVPAG00000011731
N
0.731
ENSPPYG00000001414
Pongo pygmaeus
ENSPPYG00000001414
N
0.731
TOE1
Oryctolagus cuniculus
ENSOCUG00000017503
N
0.731
TOE1
Pan troglodytes
ENSPTRG00000000672
N
0.731
TOE1
Tursiops truncatus
ENSTTRG00000008815
N
0.731
TOE1_BOVIN
Bos taurus
ENSBTAG00000011243
N
0.731
TOE1
Cavia porcellus
ENSCPOG00000012455
N
0.720