CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MBNL3
(
Ochotona princeps
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSOPRG00000011179
T03113_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000010205
CCCH ZF
17
41
LEVCREFQRGTCSRADADCKFAHPP
ENSOPRP00000010205
CCCH ZF
177
201
XXVCREFQRGNCTRGENDCRYAHPT
ENSOPRP00000010205
CCCH ZF
212
235
TVTVCMDYIKGRCSREKCKYFHPP
Links
Other
CCCH ZF
family RBPs
Other
Ochotona princeps
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MBNL3
Erinaceus europaeus
ENSEEUG00000013021
N
0.973
XR_020327.1
Pan troglodytes
ENSPTRG00000022280
N
0.921
MBNL3
Echinops telfairi
ENSETEG00000015907
N
0.921
MBNL1
Otolemur garnettii
ENSOGAG00000009336
N
0.892
MBNL1
Echinops telfairi
ENSETEG00000016568
N
0.892
MBNL2
Dasypus novemcinctus
ENSDNOG00000018141
N
0.816
MBNL2
Macaca mulatta
ENSMMUG00000022744
N
0.816
MBNL3
Tarsius syrichta
ENSTSYG00000014189
N
0.730