XR_020327.1 (Pan troglodytes)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSPTRG00000022280 T03266_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000038382 CCCH ZF 17 41
ENSPTRP00000038382 CCCH ZF 175 200
ENSPTRP00000038382 CCCH ZF 211 234
ENSPTRP00000038385 CCCH ZF 17 41
ENSPTRP00000038385 CCCH ZF 175 200
ENSPTRP00000038385 CCCH ZF 211 234
ENSPTRP00000038386 CCCH ZF 17 41
ENSPTRP00000038386 CCCH ZF 175 200
ENSPTRP00000038386 CCCH ZF 211 234
ENSPTRP00000040286 CCCH ZF 125 150
ENSPTRP00000040286 CCCH ZF 161 184

Links

Other CCCH ZF family RBPs
Other Pan troglodytes RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MBNL3 Homo sapiens ENSG00000076770 I 0.980
LOC100397507 Callithrix jacchus ENSCJAG00000004080 I 0.980
MBNL3 Macaca mulatta ENSMMUG00000003071 I 0.980
MBNL3 Echinops telfairi ENSETEG00000015907 N 0.961
A5HMN7_CHICK Gallus gallus ENSGALG00000006066 I 0.941
MBNL3 Ochotona princeps ENSOPRG00000011179 N 0.921
MBNL3 Erinaceus europaeus ENSEEUG00000013021 N 0.921
Mbnl3 Mus musculus ENSMUSG00000036109 I 0.902
fgenesh2_pg.scaffold_93000116 Branchiostoma floridae fgenesh2_pg.scaffold_93000116 N 0.882
fgenesh2_pg.scaffold_81000033 Branchiostoma floridae fgenesh2_pg.scaffold_81000033 N 0.882
MBNL1 Monodelphis domestica ENSMODG00000015838 I 0.863
MBNL1 Homo sapiens ENSG00000152601 D 0.863
MBNL2 Equus caballus ENSECAG00000020574 N 0.843
MBNL2 Dasypus novemcinctus ENSDNOG00000018141 N 0.842
MBNL2 Macaca mulatta ENSMMUG00000022744 N 0.842
mbnl1 Danio rerio ENSDARG00000052978 N 0.824
MBNL1 Echinops telfairi ENSETEG00000016568 N 0.816
MBNL1 Otolemur garnettii ENSOGAG00000009336 N 0.816
mbnl2 Danio rerio ENSDARG00000018460 I 0.804
MBNL3 Sus scrofa ENSSSCG00000012676 N 0.750
MBNL3 Tupaia belangeri ENSTBEG00000008063 N 0.737
MBNL3 Procavia capensis ENSPCAG00000014188 N 0.724
MBNL3 Ornithorhynchus anatinus ENSOANG00000011697 I 0.724
MBNL3 Monodelphis domestica ENSMODG00000015304 I 0.724
MBNL3 Cavia porcellus ENSCPOG00000008092 N 0.724
mbnl3 Xenopus tropicalis ENSXETG00000005409 I 0.714
A5PJM0_BOVIN Bos taurus ENSBTAG00000004564 N 0.701