CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZC3H4
(
Procavia capensis
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSPCAG00000014919
T03187_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000013951
CCCH ZF
391
416
KGKVICKYFMEGRCTWGDHCNFSHDI
ENSPCAP00000013951
CCCH ZF
420
445
KKRELCKFYITGFCARAENCPYMHXX
Links
Other
CCCH ZF
family RBPs
Other
Procavia capensis
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZC3H4
Callithrix jacchus
ENSCJAG00000011601
N
0.942
ZC3H4
Erinaceus europaeus
ENSEEUG00000000519
N
0.923