CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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UNK
(
Tupaia belangeri
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSTBEG00000016178
T03445_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000014075
CCCH ZF
272
298
YKSTKCNDMQQSGSCPRGPFCAFAHVE
Links
Other
CCCH ZF
family RBPs
Other
Tupaia belangeri
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
UNK
Vicugna pacos
ENSVPAG00000011532
N
1.000
UNKL
Otolemur garnettii
ENSOGAG00000001437
N
0.889
XR_022366.1
Pan troglodytes
ENSPTRG00000007591
N
0.889
unkl
Xenopus tropicalis
ENSXETG00000021599
N
0.889
ENSOANG00000021809
Ornithorhynchus anatinus
ENSOANG00000021809
N
0.889
AAH72265
Xenopus laevis
AAH72265
N
0.889
UNKL
Takifugu rubripes
ENSTRUG00000012086
N
0.852
ENSMMUG00000006693
Macaca mulatta
ENSMMUG00000006693
N
0.852
Unkl
Mus musculus
ENSMUSG00000015127
N
0.852
AAEL014545
Aedes aegypti
AAEL014545
N
0.750