CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GD14504
(
Drosophila simulans
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
FBgn0186186
T03780_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0212906
CCCH ZF
329
355
DTYSLCETFSEAHICHYGAQCVEAHGQ
Links
Other
CCCH ZF
family RBPs
Other
Drosophila simulans
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CG9425
Drosophila melanogaster
FBgn0036451
N
1.000
GE22030
Drosophila yakuba
FBgn0239262
N
1.000
GM25483
Drosophila sechellia
FBgn0180340
N
1.000
GG15699
Drosophila erecta
FBgn0107943
N
1.000
GF24619
Drosophila ananassae
FBgn0101612
N
0.963
GL26040
Drosophila persimilis
FBgn0163622
N
0.926
GA21777-RA
Drosophila pseudoobscura
FBgn0081762
N
0.926
GI13941
Drosophila mojavensis
FBgn0136695
N
0.852
GH16935
Drosophila grimshawi
FBgn0124406
N
0.852
GK10580
Drosophila willistoni
FBgn0212595
N
0.815
GJ13732
Drosophila virilis
FBgn0200953
N
0.741