CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GI13941
(
Drosophila mojavensis
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
FBgn0136695
T03735_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0163158
CCCH ZF
326
352
DTYSLCETFAEAQTCHYGAQCVEAHGL
Links
Other
CCCH ZF
family RBPs
Other
Drosophila mojavensis
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GK10580
Drosophila willistoni
FBgn0212595
N
0.926
GH16935
Drosophila grimshawi
FBgn0124406
N
0.926
GF24619
Drosophila ananassae
FBgn0101612
N
0.889
GA21777-RA
Drosophila pseudoobscura
FBgn0081762
N
0.852
GL26040
Drosophila persimilis
FBgn0163622
N
0.852
CG9425
Drosophila melanogaster
FBgn0036451
N
0.852
GE22030
Drosophila yakuba
FBgn0239262
N
0.852
GM25483
Drosophila sechellia
FBgn0180340
N
0.852
GD14504
Drosophila simulans
FBgn0186186
N
0.852
GJ13732
Drosophila virilis
FBgn0200953
N
0.852
GG15699
Drosophila erecta
FBgn0107943
N
0.852
CpipJ_CPIJ006186
Culex pipiens
CpipJ_CPIJ006186
N
0.704
CPIJ006186
Culex quinquefasciatus
CPIJ006186
N
0.704