POPTR_0008s22740 (Populus trichocarpa)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 POPTR_0008s22740 T04046_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0008s22740.1 CCCH ZF 9 34

Links

Other CCCH ZF family RBPs
Other Populus trichocarpa RBPs

3 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
POPTR_0010s02310 Populus trichocarpa POPTR_0010s02310 N 0.889
LjSGA_080419.1 Lotus japonicus LjSGA_080419.1 N 0.808
Medtr8g139290 Medicago truncatula Medtr8g139290 N 0.741