CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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EBI_26078
(
Enterocytozoon bieneusi
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
EBI_26078
T04230_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
EBI_26078
CCCH ZF
83
109
YKTELCRSYTELGFCKYGEKCQFSHSP
EBI_26078
CCCH ZF
121
147
YKTETCKVFWEYGSCPYGKRCCFLHSN
Links
Other
CCCH ZF
family RBPs
Other
Enterocytozoon bieneusi
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ein01_0730
Encephalitozoon intestinalis
Ein01_0730
N
0.778
ECU01_0830
Encephalitozoon cuniculi
ECU01_0830
N
0.759
SPPG_04528
Spizellomyces punctatus
SPPG_04528
N
0.722
AMAG_06814
Allomyces macrogynus
AMAG_06814
N
0.704
AMAG_15989
Allomyces macrogynus
AMAG_15989
N
0.704