CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Ein01_0730
(
Encephalitozoon intestinalis
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
Ein01_0730
T04255_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ein01_0730
CCCH ZF
110
136
YKTEMCRSHTEIGYCKYGDKCQFAHSK
Ein01_0730
CCCH ZF
148
174
YKTETCKTFWEEGSCPYGKRCCFIHIP
Links
Other
CCCH ZF
family RBPs
Other
Encephalitozoon intestinalis
RBPs
16 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ECU01_0830
Encephalitozoon cuniculi
ECU01_0830
N
0.981
EBI_26078
Enterocytozoon bieneusi
EBI_26078
N
0.778
SPPG_04528
Spizellomyces punctatus
SPPG_04528
N
0.759
estExt_fgenesh1_pm.C_10824
Schizophyllum commune
estExt_fgenesh1_pm.C_10824
N
0.722
estExt_genemark.C_30534
Pleurotus ostreatus
estExt_genemark.C_30534
N
0.722
fgenesh1_pg.C_scaffold_11000103
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_11000103
N
0.722
estExt_fgenesh2_pg.C_10793
Laccaria bicolor
estExt_fgenesh2_pg.C_10793
N
0.722
estExt_fgenesh3_pg.C_770054
Postia placenta
estExt_fgenesh3_pg.C_770054
N
0.722
CC1G_04402
Coprinopsis cinerea
CC1G_04402
N
0.722
DDB_G0285973
Dictyostelium discoideum
DDB_G0285973
I
0.704
estExt_fgenesh2_kg.C_10578
Serpula lacrymans
estExt_fgenesh2_kg.C_10578
N
0.704
estExt_fgeneshDP_kg.C_230001
Dictyostelium purpureum
estExt_fgeneshDP_kg.C_230001
I
0.704
EFA80829.1
Polysphondylium pallidum
EFA80829.1
I
0.704
e_gw1.1.2331.1
Agaricus bisporus
e_gw1.1.2331.1
N
0.704
AMAG_06814
Allomyces macrogynus
AMAG_06814
N
0.704
AMAG_15989
Allomyces macrogynus
AMAG_15989
N
0.704