CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Tbg972.5.2160
(
Trypanosoma brucei
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
Tbg972.5.2160
T04472_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Tbg972.5.2160
CCCH ZF
15
41
YKTSLCTYFMENGECQFGDRCAFAHGE
Links
Other
CCCH ZF
family RBPs
Other
Trypanosoma brucei
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TcIL3000.5.1510
Trypanosoma congolense
TcIL3000.5.1510
N
0.741
TcIL3000.0.49340
Trypanosoma congolense
TcIL3000.0.49340
N
0.741