CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TcIL3000.0.49340
(
Trypanosoma congolense
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
TcIL3000.0.49340
T04510_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TcIL3000.0.49340
CCCH ZF
15
41
YKTSLCSFFLEQDGCSFGDRCAFAHGE
Links
Other
CCCH ZF
family RBPs
Other
Trypanosoma congolense
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TcIL3000.5.1510
Trypanosoma congolense
TcIL3000.5.1510
N
1.000
TvY486_0501070
Trypanosoma vivax
TvY486_0501070
N
0.815
Tbg972.5.2160
Trypanosoma brucei
Tbg972.5.2160
N
0.741