SNAPOd2T00019452001 (Oikopleura dioica)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 SNAPOd2T00019452001 T04633_0.6 Genoscope (2013-Jan-11)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SNAPOd2T00019452001 CCCH ZF 10 36
SNAPOd2T00019452001 CCCH ZF 48 74

Links

Other CCCH ZF family RBPs
Other Oikopleura dioica RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh2_pg.scaffold_13000206 Monosiga brevicollis fgenesh2_pg.scaffold_13000206 N 0.741
ZFP36 Takifugu rubripes ENSTRUG00000002023 I 0.722
AMAG_15989 Allomyces macrogynus AMAG_15989 N 0.722
AMAG_06814 Allomyces macrogynus AMAG_06814 N 0.722
EFA80829.1 Polysphondylium pallidum EFA80829.1 I 0.704
SPPG_04528 Spizellomyces punctatus SPPG_04528 N 0.704
ZFP36 Gasterosteus aculeatus ENSGACG00000008344 I 0.704