fgenesh2_pg.scaffold_614000012 (Branchiostoma floridae)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 fgenesh2_pg.scaffold_614000012 T05316_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_614000012 CCCH ZF 1 18

Links

Other CCCH ZF family RBPs
Other Branchiostoma floridae RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh2_pg.scaffold_31000079 Branchiostoma floridae fgenesh2_pg.scaffold_31000079 N 1.000
ENSCING00000009595 Ciona intestinalis ENSCING00000009595 N 0.944
FGSG_06067 Fusarium graminearum FGSG_06067 N 0.842
ENSCSAVG00000005311 Ciona savignyi ENSCSAVG00000005311 N 0.778
PABG_07018 Paracoccidioides brasiliensis PABG_07018 N 0.737