CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FGSG_06067
(
Fusarium graminearum
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
FGSG_06067
T01365_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FGSG_06067T0
CCCH ZF
1
19
MVICKFFQQGNCKFGSRCR
Links
Other
CCCH ZF
family RBPs
Other
Fusarium graminearum
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSCING00000009595
Ciona intestinalis
ENSCING00000009595
N
0.895
fgenesh2_pg.scaffold_614000012
Branchiostoma floridae
fgenesh2_pg.scaffold_614000012
N
0.842
fgenesh2_pg.scaffold_31000079
Branchiostoma floridae
fgenesh2_pg.scaffold_31000079
N
0.842
ENSCSAVG00000005311
Ciona savignyi
ENSCSAVG00000005311
N
0.737
ACLA_092660
Aspergillus clavatus
CADACLAG00008386
N
0.737
e_gw1.3.1374.1
Nectria haematococca
e_gw1.3.1374.1
N
0.737