fgeneshPB_pg.44__45 (Phycomyces blakesleeanus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 fgeneshPB_pg.44__45 T05376_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgeneshPB_pg.44__45 CCCH ZF 283 309
fgeneshPB_pg.44__45 CCCH ZF 321 347

Links

Other CCCH ZF family RBPs
Other Phycomyces blakesleeanus RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RO3G_05094 Rhizopus oryzae RO3G_05094 N 0.815
RO3G_10992 Rhizopus oryzae RO3G_10992 N 0.815
fgeneshMC_pg.8_#_109 Mucor circinelloides fgeneshMC_pg.8_#_109 N 0.778
estExt_fgenesh3_pg.C_770054 Postia placenta estExt_fgenesh3_pg.C_770054 N 0.704
estExt_fgeneshPB_pg.C_240063 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_240063 N 0.704
fgeneshMC_pg.4_#_694 Mucor circinelloides fgeneshMC_pg.4_#_694 N 0.704
estExt_fgenesh2_pg.C_10793 Laccaria bicolor estExt_fgenesh2_pg.C_10793 N 0.704
fgenesh1_pg.C_scaffold_11000103 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_11000103 N 0.704
estExt_fgenesh1_pm.C_10824 Schizophyllum commune estExt_fgenesh1_pm.C_10824 N 0.704
CC1G_04402 Coprinopsis cinerea CC1G_04402 N 0.704
RO3G_02441 Rhizopus oryzae RO3G_02441 N 0.704
estExt_fgenesh2_kg.C_10578 Serpula lacrymans estExt_fgenesh2_kg.C_10578 N 0.704
e_gw1.1.2331.1 Agaricus bisporus e_gw1.1.2331.1 N 0.704
estExt_genemark.C_30534 Pleurotus ostreatus estExt_genemark.C_30534 N 0.704