RO3G_05094 (Rhizopus oryzae)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 RO3G_05094 T01552_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
RO3T_05093 CCCH ZF 102 128
RO3T_05093 CCCH ZF 140 164

Links

Other CCCH ZF family RBPs
Other Rhizopus oryzae RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RO3G_10992 Rhizopus oryzae RO3G_10992 N 1.000
fgeneshMC_pg.8_#_109 Mucor circinelloides fgeneshMC_pg.8_#_109 N 0.904
fgeneshPB_pg.44__45 Phycomyces blakesleeanus fgeneshPB_pg.44__45 N 0.815
0300010273 Ostreococcus tauri 0300010273 I 0.731
gw1.1.1133.1 Micromonas pusilla gw1.1.1133.1 N 0.731
estExt_genemark.C_30534 Pleurotus ostreatus estExt_genemark.C_30534 N 0.722
138584 Helobdella robusta 138584 N 0.717
gwEuk.3.753.1 Ostreococcus lucimarinus gwEuk.3.753.1 I 0.712
gw1.3.668.1 Ostreococcus RCC809 gw1.3.668.1 I 0.712
gw1.57.55.1 Melampsora laricis populina gw1.57.55.1 N 0.712
CC1G_04402 Coprinopsis cinerea CC1G_04402 N 0.704
fgenesh2_pg.C_scaffold_32000041 Selaginella moellendorfii fgenesh2_pg.C_scaffold_32000041 N 0.704
e_gw1.45.79.1 Selaginella moellendorfii e_gw1.45.79.1 N 0.704
ENSTRUG00000003178 Takifugu rubripes ENSTRUG00000003178 I 0.704
ENSTNIG00000019802 Tetraodon nigroviridis ENSTNIG00000019802 I 0.704
estExt_fgenesh1_pm.C_10824 Schizophyllum commune estExt_fgenesh1_pm.C_10824 N 0.704
estExt_fgenesh2_pg.C_10793 Laccaria bicolor estExt_fgenesh2_pg.C_10793 N 0.704
fgenesh1_pg.C_scaffold_11000103 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_11000103 N 0.704
estExt_fgeneshPB_pg.C_240063 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_240063 N 0.704
estExt_fgenesh3_pg.C_770054 Postia placenta estExt_fgenesh3_pg.C_770054 N 0.704
fgeneshMC_pg.4_#_694 Mucor circinelloides fgeneshMC_pg.4_#_694 N 0.704