GRMZM2G119640 (Zea mays)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 GRMZM2G119640 T05718_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G119640_P01 CCCH ZF 33 57
GRMZM2G119640_P02 CCCH ZF 33 57
GRMZM2G119640_P04 CCCH ZF 33 57
GRMZM2G119640_P06 CCCH ZF 33 57

Links

Other CCCH ZF family RBPs
Other Zea mays RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SB04G004243 Sorghum bicolor Sb04g004243 N 1.000
LOC_Os02g06584 Oryza sativa LOC_Os02g06584 N 0.920
BGIOSIBCE005715 Oryza indica BGIOSIBCE005715 N 0.920
fgenesh2_pg.C_scaffold_4000092 Selaginella moellendorfii fgenesh2_pg.C_scaffold_4000092 N 0.760
GRMZM2G044398 Zea mays GRMZM2G044398 N 0.731
SB10G027530 Sorghum bicolor Sb10g027530 N 0.731
GRMZM2G336065 Zea mays GRMZM2G336065 N 0.731
GSVIVG00030622001 Vitis vinifera GSVIVG00030622001 N 0.720
LOC_Os06g46890 Oryza sativa LOC_Os06g46890 N 0.720
cassava29266.valid.m1 Manihot esculenta cassava29266.valid.m1 N 0.720
BGIOSIBCE023057 Oryza indica BGIOSIBCE023057 N 0.720