Medtr5g097070 (Medicago truncatula)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 Medtr5g097070 T05790_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr5g097070.1 CCCH ZF 50 67
Medtr5g097070.1 CCCH ZF 79 105

Links

Other CCCH ZF family RBPs
Other Medicago truncatula RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma20g25710.1 Glycine max Glyma20g25710.1 N 0.778
Glyma10g41530.1 Glycine max Glyma10g41530.1 N 0.778
AC235678_14 Medicago truncatula AC235678_14 N 0.778
Cucsa.280660 Cucumis sativus Cucsa.280660 N 0.759
chr5.CM0328.460.nd Lotus japonicus chr5.CM0328.460.nd N 0.741
cassava40081.m1 Manihot esculenta cassava40081.m1 N 0.722
XM_002887123.1 Arabidopsis lyrata fgenesh2_kg.2__1068__AT1G68200.1 N 0.722
MDP0000251967 Malus x domestica MDP0000251967 N 0.722
AT1G68200 Arabidopsis thaliana AT1G68200-TAIR-G N 0.722
GSVIVG00011819001 Vitis vinifera GSVIVG00011819001 N 0.722
GRMZM2G149347 Zea mays GRMZM2G149347 N 0.704
29660.m000770 Ricinus communis 29660.m000770 N 0.704
MDP0000313949 Malus x domestica MDP0000313949 N 0.704
ppa017322m Prunus persica ppa017322m N 0.704
cassava10040.m1 Manihot esculenta cassava10040.m1 N 0.704
cassava2640.m1 Manihot esculenta cassava2640.m1 N 0.704