Genemark.6481_g (Agaricus bisporus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 Genemark.6481_g T06150_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Genemark.6481_g CCCH ZF 48 71
Genemark.6481_g CCCH ZF 79 101

Links

Other CCCH ZF family RBPs
Other Agaricus bisporus RBPs

9 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CC1G_08614 Coprinopsis cinerea CC1G_08614 N 0.898
fgenesh1_pg.C_scaffold_7000208 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_7000208 N 0.898
EuGene12000543 Heterobasidion annosum EuGene12000543 N 0.857
augustus-scaffold_9.g315 Schizophyllum commune augustus-scaffold_9.g315 N 0.833
estExt_fgeneshTM_pg.C_60122 Tremella mesenterica estExt_fgeneshTM_pg.C_60122 N 0.771
CNBG_3909 Cryptococcus neoformans CNBG_3909 N 0.740
orf19.7385 Candida albicans orf19.7385 N 0.729
CPAG_02338 Candida parapsilosis CPAG_02338 N 0.708
DEHA0D17303g Debaryomyces hansenii DEHA0D17303g N 0.708