CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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WUBG_05719
(
Wuchereria bancrofti
)
CCHC ZF,KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
PF00013 (KH_1)
IPR001878
IPR018111
WUBG_05719
T06967_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
WUBG_05719T0
KH
336
419
DKVWIPQENHPEINFVGLLIGPRGNTLKALEAETGAKIIIRGKGSVKEGKLGRREGPMPGENEPLHAYVTGTDYAVIKKACEKI
WUBG_05719T0
CCHC ZF
485
502
IICTACGAAGHIAKDCKN
Links
Other
CCHC ZF,KH
family RBPs
Other
Wuchereria bancrofti
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOAG_00808
Loa loa
LOAG_00808
N
0.980
Minc06531
Meloidogyne incognita
Minc06531
N
0.853
Minc19096
Meloidogyne incognita
Minc19096
N
0.813
estExt_fgenesh1_pg.C_1320011
Capitella teleta
estExt_fgenesh1_pg.C_1320011
N
0.748
BGIBMGA013450
Bombyx mori
BGIBMGA013450
N
0.738