sf1 (Danio rerio)
CCHC ZF,KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00013 (KH_1) 		IPR001878
IPR018111 		ENSDARG00000008188 T06991_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000026464 KH 220 294
ENSDARP00000026464 CCHC ZF 349 365

Links

Other CCHC ZF,KH family RBPs
Other Danio rerio RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SF1 Tetraodon nigroviridis ENSTNIG00000004820 N 1.000
SF1 Gasterosteus aculeatus ENSGACG00000000826 N 1.000
SF1 Oryzias latipes ENSORLG00000011853 N 1.000
SF1 Tupaia belangeri ENSTBEG00000013133 N 0.967
SF1 Tursiops truncatus ENSTTRG00000008857 N 0.967
Sf1 Rattus norvegicus ENSRNOG00000021085 N 0.967
SF1 Pan troglodytes ENSPTRG00000003846 N 0.967
SF1 Pteropus vampyrus ENSPVAG00000016938 N 0.967
Ame_R004551 Ailuropoda melanoleuca Ame_R004551 N 0.967
SF1 Sus scrofa ENSSSCG00000013021 N 0.967
AAH46717 Xenopus laevis AAH46717 N 0.967
SF1 Choloepus hoffmanni ENSCHOG00000006008 N 0.967
B0KWK3_CALJA Callithrix jacchus ENSCJAG00000002780 N 0.967
SF1 Cavia porcellus ENSCPOG00000012290 N 0.967
SF1 Canis familiaris ENSCAFG00000014239 N 0.967
SF1 Bos taurus ENSBTAG00000001035 N 0.967
AAI10719 Xenopus laevis AAI10719 N 0.967
SF1 Anolis carolinensis ENSACAG00000016404 N 0.967
Sf1 Dipodomys ordii ENSDORG00000016334 N 0.967
ENSPPYG00000003098 Pongo pygmaeus ENSPPYG00000003098 N 0.967
SF1 Macropus eugenii ENSMEUG00000013424 N 0.967
SF1 Microcebus murinus ENSMICG00000001202 N 0.967
SF1 Procavia capensis ENSPCAG00000013631 N 0.967
SF1 Loxodonta africana ENSLAFG00000007201 N 0.967
SF1 Gorilla gorilla ENSGGOG00000012733 N 0.967
SF1 Felis catus ENSFCAG00000012231 N 0.967
SF1 Homo sapiens ENSG00000168066 N 0.967
SF1 Equus caballus ENSECAG00000024544 N 0.967
SF1 Myotis lucifugus ENSMLUG00000015217 N 0.967
B7NZI1_RABIT Oryctolagus cuniculus ENSOCUG00000026486 N 0.967
SF1 Ochotona princeps ENSOPRG00000005008 N 0.967
SF1 Ornithorhynchus anatinus ENSOANG00000002909 N 0.967
Sf1 Mus musculus ENSMUSG00000024949 N 0.967
SF1 Echinops telfairi ENSETEG00000012830 N 0.967
SF1 Macaca mulatta ENSMMUG00000022606 N 0.967
SF1 Erinaceus europaeus ENSEEUG00000001058 N 0.957
sf1 Xenopus tropicalis ENSXETG00000008434 N 0.957
SF1 Taeniopygia guttata ENSTGUG00000016087 N 0.837
estExt_fgenesh1_pg.C_1320011 Capitella teleta estExt_fgenesh1_pg.C_1320011 N 0.725