sf1 (Xenopus tropicalis)
CCHC ZF,KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00013 (KH_1) 		IPR001878
IPR018111 		ENSXETG00000008434 T07020_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000018471 KH 137 211
ENSXETP00000018471 CCHC ZF 266 282

Links

Other CCHC ZF,KH family RBPs
Other Xenopus tropicalis RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Sf1 Mus musculus ENSMUSG00000024949 N 0.989
SF1 Ornithorhynchus anatinus ENSOANG00000002909 N 0.989
B7NZI1_RABIT Oryctolagus cuniculus ENSOCUG00000026486 N 0.989
SF1 Macaca mulatta ENSMMUG00000022606 N 0.989
SF1 Myotis lucifugus ENSMLUG00000015217 N 0.989
SF1 Loxodonta africana ENSLAFG00000007201 N 0.989
SF1 Macropus eugenii ENSMEUG00000013424 N 0.989
SF1 Microcebus murinus ENSMICG00000001202 N 0.989
SF1 Ochotona princeps ENSOPRG00000005008 N 0.989
SF1 Procavia capensis ENSPCAG00000013631 N 0.989
SF1 Sus scrofa ENSSSCG00000013021 N 0.989
SF1 Tupaia belangeri ENSTBEG00000013133 N 0.989
SF1 Tursiops truncatus ENSTTRG00000008857 N 0.989
Sf1 Rattus norvegicus ENSRNOG00000021085 N 0.989
SF1 Pteropus vampyrus ENSPVAG00000016938 N 0.989
ENSPPYG00000003098 Pongo pygmaeus ENSPPYG00000003098 N 0.989
SF1 Pan troglodytes ENSPTRG00000003846 N 0.989
SF1 Homo sapiens ENSG00000168066 N 0.989
SF1 Gorilla gorilla ENSGGOG00000012733 N 0.989
SF1 Bos taurus ENSBTAG00000001035 N 0.989
SF1 Canis familiaris ENSCAFG00000014239 N 0.989
SF1 Choloepus hoffmanni ENSCHOG00000006008 N 0.989
SF1 Anolis carolinensis ENSACAG00000016404 N 0.989
AAI10719 Xenopus laevis AAI10719 N 0.989
Ame_R004551 Ailuropoda melanoleuca Ame_R004551 N 0.989
AAH46717 Xenopus laevis AAH46717 N 0.989
SF1 Cavia porcellus ENSCPOG00000012290 N 0.989
B0KWK3_CALJA Callithrix jacchus ENSCJAG00000002780 N 0.989
SF1 Echinops telfairi ENSETEG00000012830 N 0.989
SF1 Felis catus ENSFCAG00000012231 N 0.989
Sf1 Dipodomys ordii ENSDORG00000016334 N 0.989
SF1 Equus caballus ENSECAG00000024544 N 0.989
SF1 Erinaceus europaeus ENSEEUG00000001058 N 0.978
SF1 Gasterosteus aculeatus ENSGACG00000000826 N 0.957
SF1 Tetraodon nigroviridis ENSTNIG00000004820 N 0.957
sf1 Danio rerio ENSDARG00000008188 N 0.957
SF1 Oryzias latipes ENSORLG00000011853 N 0.957
SF1 Taeniopygia guttata ENSTGUG00000016087 N 0.859
estExt_fgenesh1_pg.C_1320011 Capitella teleta estExt_fgenesh1_pg.C_1320011 N 0.735
ENSCING00000005564 Ciona intestinalis ENSCING00000005564 N 0.702
ENSCSAVG00000009055 Ciona savignyi ENSCSAVG00000009055 N 0.702