GA19167-RA (Drosophila pseudoobscura)
CCHC ZF,KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00013 (KH_1) 		IPR001878
IPR018111 		FBgn0079164 T07022_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0271977 KH 401 486
FBpp0271977 CCHC ZF 548 565

Links

Other CCHC ZF,KH family RBPs
Other Drosophila pseudoobscura RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SF1 Drosophila melanogaster FBgn0025571 N 1.000
BGIBMGA013450 Bombyx mori BGIBMGA013450 N 0.827
estExt_fgenesh1_pg.C_1320011 Capitella teleta estExt_fgenesh1_pg.C_1320011 N 0.798
Minc06531 Meloidogyne incognita Minc06531 N 0.731
ENSCSAVG00000009055 Ciona savignyi ENSCSAVG00000009055 N 0.702
LOAG_00808 Loa loa LOAG_00808 N 0.702
ENSCING00000005564 Ciona intestinalis ENSCING00000005564 N 0.702