CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DDB_G0284245
(
Dictyostelium discoideum
)
CCHC ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1)
IPR001878
IPR000504
DDB_G0284245
T07194_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
DDB0233309
RRM
4
66
IYIGRLNHDAREDDLYGRFSKFGKIDRLELRKGFCFIEYFDKASADDAINSEHKQNFLGRNII
DDB0233309
CCHC ZF
84
101
GKCFMCNEEGHWARSCPN
Links
Other
CCHC ZF,RRM
family RBPs
Other
Dictyostelium discoideum
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExt_fgeneshDP_pg.C_3250004
Dictyostelium purpureum
estExt_fgeneshDP_pg.C_3250004
N
0.778