CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Zcchc14
(
Mus musculus
)
CCHC ZF,SAM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
PF00536 (SAM_1)
IPR001878
IPR021129
ENSMUSG00000061410
T07775_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000040360
SAM
302
359
QEQNGILDWLRKLRLHKYYPVFKQLTMEKFLSLTEEDLNKFESLTMGAKKKLKTQLEL
ENSMUSP00000040360
CCHC ZF
913
930
LSCYNCGATGHRAQDCKQ
ENSMUSP00000104534
SAM
302
359
QEQNGILDWLRKLRLHKYYPVFKQLTMEKFLSLTEEDLNKFESLTMGAKKKLKTQLEL
ENSMUSP00000104534
CCHC ZF
913
930
LSCYNCGATGHRAQDCKQ
ENSMUSP00000120570
CCHC ZF
211
228
LSCYNCGATGHRAQDCKQ
Links
Other
CCHC ZF,SAM
family RBPs
Other
Mus musculus
RBPs
75 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Zcchc14
Rattus norvegicus
ENSRNOG00000018226
N
1.000
ZCCHC14
Sus scrofa
ENSSSCG00000002656
N
1.000
ZCCHC14
Spermophilus tridecemlineatus
ENSSTOG00000006167
N
1.000
Zcchc14
Dipodomys ordii
ENSDORG00000013867
N
1.000
ZCCHC14
Cavia porcellus
ENSCPOG00000007705
N
1.000
ZCCHC14
Vicugna pacos
ENSVPAG00000010067
N
1.000
Ame_R001151
Ailuropoda melanoleuca
Ame_R001151
N
1.000
ZCCHC14
Sorex araneus
ENSSARG00000011864
N
0.987
ZCCHC14
Myotis lucifugus
ENSMLUG00000015605
N
0.974
ZCCHC14
Microcebus murinus
ENSMICG00000007362
N
0.974
ZCCHC14
Erinaceus europaeus
ENSEEUG00000011890
N
0.974
LOC100070592
Equus caballus
ENSECAG00000013066
N
0.974
ZCCHC14
Canis familiaris
ENSCAFG00000019907
N
0.974
ZCCHC14
Callithrix jacchus
ENSCJAG00000004460
N
0.974
ZCCHC14
Monodelphis domestica
ENSMODG00000004488
N
0.974
ZCCHC14
Loxodonta africana
ENSLAFG00000013845
N
0.974
ZCCHC14
Procavia capensis
ENSPCAG00000013438
N
0.974
ZCCHC14
Tupaia belangeri
ENSTBEG00000001210
N
0.974
ZCCHC14
Ochotona princeps
ENSOPRG00000008429
N
0.974
ENSOANG00000003350
Ornithorhynchus anatinus
ENSOANG00000003350
N
0.974
ZCCHC14
Tursiops truncatus
ENSTTRG00000008840
N
0.974
ZCCHC14
Otolemur garnettii
ENSOGAG00000004257
N
0.974
ZCCHC14
Bos taurus
ENSBTAG00000014267
N
0.962
ZCCHC14
Choloepus hoffmanni
ENSCHOG00000012076
N
0.962
ZCCHC14
Macaca mulatta
ENSMMUG00000017615
N
0.962
ENSPPYG00000007629
Pongo pygmaeus
ENSPPYG00000007629
N
0.962
ZCCHC14
Homo sapiens
ENSG00000140948
N
0.962
ZCCHC14
Gorilla gorilla
ENSGGOG00000026113
N
0.962
ZCCHC14
Pan troglodytes
ENSPTRG00000008446
N
0.962
ZCCHC14
Oryctolagus cuniculus
ENSOCUG00000009286
N
0.962
ZCCHC14
Taeniopygia guttata
ENSTGUG00000007612
N
0.962
ZCCHC14
Meleagris gallopavo
ENSMGAG00000007316
N
0.962
ZCCHC14
Gallus gallus
ENSGALG00000005771
N
0.949
ZCCHC14
Anolis carolinensis
ENSACAG00000014623
N
0.948
ZCCHC14
Danio rerio
ENSDARG00000012738
N
0.833
ZCCHC14
Gasterosteus aculeatus
ENSGACG00000003190
N
0.816
ZCCHC2
Pteropus vampyrus
ENSPVAG00000013017
N
0.778
XR_023288.1
Pan troglodytes
ENSPTRG00000010076
N
0.778
Zcchc2
Rattus norvegicus
ENSRNOG00000002882
N
0.778
ZCCHC2
Spermophilus tridecemlineatus
ENSSTOG00000015357
N
0.778
ENSPPYG00000009208
Pongo pygmaeus
ENSPPYG00000009208
N
0.778
ZCCHC2
Tarsius syrichta
ENSTSYG00000007331
N
0.778
Zcchc2
Mus musculus
ENSMUSG00000038866
N
0.778
ZCCHC2
Homo sapiens
ENSG00000141664
N
0.778
ZCCHC2
Echinops telfairi
ENSETEG00000002750
N
0.778
ZCCHC2
Gallus gallus
ENSGALG00000012889
N
0.778
ZCCHC2
Gorilla gorilla
ENSGGOG00000002966
N
0.778
ZCCHC2
Procavia capensis
ENSPCAG00000010194
N
0.778
Zcchc2
Dipodomys ordii
ENSDORG00000010199
N
0.778
ZCCHC2
Dasypus novemcinctus
ENSDNOG00000015952
N
0.778
ZCCHC2
Choloepus hoffmanni
ENSCHOG00000002359
N
0.778
ZCCHC2
Anolis carolinensis
ENSACAG00000011813
N
0.778
LOC100394789
Callithrix jacchus
ENSCJAG00000003312
N
0.778
ZCCHC2
Cavia porcellus
ENSCPOG00000014085
N
0.778
ZCCHC2
Danio rerio
ENSDARG00000067950
N
0.778
ZCCHC2
Meleagris gallopavo
ENSMGAG00000004834
N
0.778
ZCCHC2
Loxodonta africana
ENSLAFG00000021566
N
0.778
ZCCHC2
Oryctolagus cuniculus
ENSOCUG00000012130
N
0.778
ZCCHC2
Microcebus murinus
ENSMICG00000001550
N
0.778
ZCCHC2
Otolemur garnettii
ENSOGAG00000014258
N
0.778
ZCCHC2
Monodelphis domestica
ENSMODG00000005101
N
0.778
ZCCHC2
Macaca mulatta
ENSMMUG00000004434
N
0.778
ZCCHC2
Ochotona princeps
ENSOPRG00000008527
N
0.778
ENSTRUG00000006187
Takifugu rubripes
ENSTRUG00000006187
N
0.722
ZCCHC2
Sus scrofa
ENSSSCG00000004897
N
0.722
ZCCHC2
Canis familiaris
ENSCAFG00000000073
N
0.722
ENSOANG00000012779
Ornithorhynchus anatinus
ENSOANG00000012779
N
0.722
ZCCHC2
Equus caballus
ENSECAG00000014990
N
0.722
Ame_R005457
Ailuropoda melanoleuca
Ame_R005457
N
0.722
ZCCHC2
Myotis lucifugus
ENSMLUG00000009495
N
0.722
ZCCHC2
Felis catus
ENSFCAG00000010919
N
0.722
ZCCHC2
Vicugna pacos
ENSVPAG00000009934
N
0.722
ZCCHC2
Erinaceus europaeus
ENSEEUG00000008744
N
0.722
ZCCHC2
Tursiops truncatus
ENSTTRG00000013533
N
0.722