CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZCCHC2
(
Procavia capensis
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ENSPCAG00000010194
T10407_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000009533
CCHC ZF
851
868
VSCYNCGVSGHYAQDCKQ
Links
Other
CCHC ZF
family RBPs
Other
Procavia capensis
RBPs
40 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC100394789
Callithrix jacchus
ENSCJAG00000003312
N
1.000
ZCCHC2
Cavia porcellus
ENSCPOG00000014085
N
1.000
ZCCHC2
Choloepus hoffmanni
ENSCHOG00000002359
N
1.000
ZCCHC2
Gorilla gorilla
ENSGGOG00000002966
N
1.000
ZCCHC2
Anolis carolinensis
ENSACAG00000011813
N
1.000
ENSPPYG00000009208
Pongo pygmaeus
ENSPPYG00000009208
N
1.000
ZCCHC2
Dasypus novemcinctus
ENSDNOG00000015952
N
1.000
ZCCHC2
Echinops telfairi
ENSETEG00000002750
N
1.000
ZCCHC2
Homo sapiens
ENSG00000141664
N
1.000
ZCCHC2
Gallus gallus
ENSGALG00000012889
N
1.000
Zcchc2
Dipodomys ordii
ENSDORG00000010199
N
1.000
ZCCHC2
Loxodonta africana
ENSLAFG00000021566
N
1.000
ZCCHC2
Meleagris gallopavo
ENSMGAG00000004834
N
1.000
ZCCHC2
Oryctolagus cuniculus
ENSOCUG00000012130
N
1.000
ZCCHC2
Spermophilus tridecemlineatus
ENSSTOG00000015357
N
1.000
ZCCHC2
Otolemur garnettii
ENSOGAG00000014258
N
1.000
Zcchc2
Rattus norvegicus
ENSRNOG00000002882
N
1.000
XR_023288.1
Pan troglodytes
ENSPTRG00000010076
N
1.000
Zcchc2
Mus musculus
ENSMUSG00000038866
N
1.000
ZCCHC2
Microcebus murinus
ENSMICG00000001550
N
1.000
ZCCHC2
Macaca mulatta
ENSMMUG00000004434
N
1.000
ZCCHC2
Monodelphis domestica
ENSMODG00000005101
N
1.000
ZCCHC2
Ochotona princeps
ENSOPRG00000008527
N
1.000
ENSOANG00000012779
Ornithorhynchus anatinus
ENSOANG00000012779
N
0.944
ZCCHC2
Felis catus
ENSFCAG00000010919
N
0.944
ZCCHC2
Danio rerio
ENSDARG00000067950
N
0.944
ZCCHC2
Tursiops truncatus
ENSTTRG00000013533
N
0.944
ZCCHC2
Erinaceus europaeus
ENSEEUG00000008744
N
0.944
Ame_R005457
Ailuropoda melanoleuca
Ame_R005457
N
0.944
ZCCHC2
Tarsius syrichta
ENSTSYG00000007331
N
0.944
ZCCHC2
Sus scrofa
ENSSSCG00000004897
N
0.944
ZCCHC2
Equus caballus
ENSECAG00000014990
N
0.944
ZCCHC2
Canis familiaris
ENSCAFG00000000073
N
0.944
ZCCHC2
Vicugna pacos
ENSVPAG00000009934
N
0.944
ZCCHC2
Myotis lucifugus
ENSMLUG00000009495
N
0.889
ZCCHC2
Pteropus vampyrus
ENSPVAG00000013017
N
0.833
ZCCHC14
Meleagris gallopavo
ENSMGAG00000007316
N
0.833
nasonia_NCBI_hmm396104
Nasonia vitripennis
nasonia_NCBI_hmm396104
N
0.778
Zcchc14
Mus musculus
ENSMUSG00000061410
N
0.778
ZCCHC14
Vicugna pacos
ENSVPAG00000010067
N
0.778