CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CC1G_10587
(
Coprinopsis cinerea
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
CC1G_10587
T07891_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CC1G_10587T0
CCHC ZF
155
171
PRCFNCGHEEHTVKECP
Links
Other
CCHC ZF
family RBPs
Other
Coprinopsis cinerea
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZCCHC8
Tupaia belangeri
ENSTBEG00000006192
N
0.722
D3ZUL8_RAT
Rattus norvegicus
ENSRNOG00000001243
N
0.722
Zcchc8
Mus musculus
ENSMUSG00000029427
N
0.722
ZCCHC8
Echinops telfairi
ENSETEG00000004735
N
0.722
ZCCHC8
Microcebus murinus
ENSMICG00000013486
N
0.706