CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZCCHC8
(
Echinops telfairi
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ENSETEG00000004735
T10163_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000003865
CCHC ZF
225
242
PHCFNCGSEEHQMKECPM
Links
Other
CCHC ZF
family RBPs
Other
Echinops telfairi
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Zcchc8
Mus musculus
ENSMUSG00000029427
N
1.000
D3ZUL8_RAT
Rattus norvegicus
ENSRNOG00000001243
N
1.000
ZCCHC8
Pan troglodytes
ENSPTRG00000005579
N
0.944
ENSPPYG00000005068
Pongo pygmaeus
ENSPPYG00000005068
N
0.944
Ame_R000861
Ailuropoda melanoleuca
Ame_R000861
N
0.944
ZCCHC8
Ochotona princeps
ENSOPRG00000013758
N
0.944
ZCCHC8
Pteropus vampyrus
ENSPVAG00000001276
N
0.944
ZCCHC8
Felis catus
ENSFCAG00000010608
N
0.944
ZCCHC8
Spermophilus tridecemlineatus
ENSSTOG00000001683
N
0.944
ZCCHC8
Sus scrofa
ENSSSCG00000009792
N
0.944
ZCCHC8
Tursiops truncatus
ENSTTRG00000015809
N
0.944
ZCCHC8
Oryctolagus cuniculus
ENSOCUG00000013759
N
0.944
ZCCHC8
Bos taurus
ENSBTAG00000006114
N
0.944
ZCCHC8
Dasypus novemcinctus
ENSDNOG00000008881
N
0.944
Zcchc8
Dipodomys ordii
ENSDORG00000008756
N
0.944
ZCCHC8
Equus caballus
ENSECAG00000006984
N
0.944
ZCCHC8
Gorilla gorilla
ENSGGOG00000027926
N
0.944
ZCCHC8
Cavia porcellus
ENSCPOG00000014385
N
0.944
ZCCHC8
Callithrix jacchus
ENSCJAG00000020409
N
0.944
ZCCHC8
Homo sapiens
ENSG00000033030
N
0.944
ZCCHC8
Canis familiaris
ENSCAFG00000007859
N
0.944
ZCCHC8
Macaca mulatta
ENSMMUG00000013643
N
0.944
ZCCHC8
Tupaia belangeri
ENSTBEG00000006192
N
0.889
ZCCHC8
Sorex araneus
ENSSARG00000003982
N
0.889
ZCCHC8
Microcebus murinus
ENSMICG00000013486
N
0.889
ZCCHC8
Myotis lucifugus
ENSMLUG00000005334
N
0.889
ZCCHC8
Monodelphis domestica
ENSMODG00000012264
N
0.889
ZCCHC8
Procavia capensis
ENSPCAG00000016551
N
0.889
ZCCHC8
Macropus eugenii
ENSMEUG00000003497
N
0.889
ZCCHC8
Taeniopygia guttata
ENSTGUG00000006286
N
0.833
ZCCHC8
Loxodonta africana
ENSLAFG00000016477
N
0.833
ZCCHC8
Ornithorhynchus anatinus
ENSOANG00000006199
N
0.833
ZCCHC8
Meleagris gallopavo
ENSMGAG00000004799
N
0.778
ZCCHC8
Anolis carolinensis
ENSACAG00000001545
N
0.778
ZCCHC8
Gallus gallus
ENSGALG00000004486
N
0.778
zcchc8
Xenopus tropicalis
ENSXETG00000007797
N
0.778
AAH77784
Xenopus laevis
AAH77784
N
0.778
Q6DD45
Xenopus laevis
Q6DD45
N
0.778
CC1G_10587
Coprinopsis cinerea
CC1G_10587
N
0.722